Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.79□□□□□ -0.52
RNF183Q96D59 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.79□□□□□ -0.52
RNF183Q96D59 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.79□□□□□ -0.52
RNF183Q96D59 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 AC138035.3-201ENST00000622706 2791 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RNF183Q96D59 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.78□□□□□ -0.52
RNF183Q96D59 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
RNF183Q96D59 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.78□□□□□ -0.52
RNF183Q96D59 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.78□□□□□ -0.52
RNF183Q96D59 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.78□□□□□ -0.52
RNF183Q96D59 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.78□□□□□ -0.52
RNF183Q96D59 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.78□□□□□ -0.52
RNF183Q96D59 SERBP1P3-201ENST00000459980 809 ntBASIC11.78□□□□□ -0.52
RNF183Q96D59 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.78□□□□□ -0.52
RNF183Q96D59 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.78□□□□□ -0.52
RNF183Q96D59 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.78□□□□□ -0.52
RNF183Q96D59 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.78□□□□□ -0.52
RNF183Q96D59 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RNF183Q96D59 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.78□□□□□ -0.52
RNF183Q96D59 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.78□□□□□ -0.52
RNF183Q96D59 AC239800.4-201ENST00000603712 296 ntBASIC11.78□□□□□ -0.52
RNF183Q96D59 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
RNF183Q96D59 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
RNF183Q96D59 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RNF183Q96D59 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.78□□□□□ -0.52
RNF183Q96D59 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RNF183Q96D59 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RNF183Q96D59 CR383656.2-201ENST00000548656 2254 ntBASIC11.77□□□□□ -0.52
RNF183Q96D59 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RNF183Q96D59 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RNF183Q96D59 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
RNF183Q96D59 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.52
RNF183Q96D59 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RNF183Q96D59 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
RNF183Q96D59 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RNF183Q96D59 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
RNF183Q96D59 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
RNF183Q96D59 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.77□□□□□ -0.52
RNF183Q96D59 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.77□□□□□ -0.52
RNF183Q96D59 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.77□□□□□ -0.52
RNF183Q96D59 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.77□□□□□ -0.52
RNF183Q96D59 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
RNF183Q96D59 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RNF183Q96D59 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.77□□□□□ -0.52
RNF183Q96D59 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.77□□□□□ -0.53
RNF183Q96D59 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF183Q96D59 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
RNF183Q96D59 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms