Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 AC103702.1-201ENST00000548801 2630 ntBASIC16.67■□□□□ 0.26
ATP2A3Q93084 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP2A3Q93084 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP2A3Q93084 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.66■□□□□ 0.26
ATP2A3Q93084 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A3Q93084 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATP2A3Q93084 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 AP006294.1-201ENST00000415407 339 ntBASIC16.65■□□□□ 0.26
ATP2A3Q93084 MEP1AP4-201ENST00000423244 1087 ntBASIC16.65■□□□□ 0.26
ATP2A3Q93084 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 AC055876.2-201ENST00000531834 546 ntBASIC16.65■□□□□ 0.26
ATP2A3Q93084 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 MIR4321-201ENST00000592276 80 ntBASIC16.65■□□□□ 0.26
ATP2A3Q93084 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms