Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRFBP1Q8NEF9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.08■□□□□ 0.01
SRFBP1Q8NEF9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SRFBP1Q8NEF9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SRFBP1Q8NEF9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SRFBP1Q8NEF9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SRFBP1Q8NEF9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SRFBP1Q8NEF9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SRFBP1Q8NEF9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
SRFBP1Q8NEF9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 C8orf49-201ENST00000525043 1968 ntBASIC15.08■□□□□ 0
SRFBP1Q8NEF9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 MIR943-201ENST00000401286 94 ntBASIC15.08■□□□□ 0
SRFBP1Q8NEF9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 AC092183.1-201ENST00000469884 875 ntBASIC15.08■□□□□ 0
SRFBP1Q8NEF9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 AC087499.5-201ENST00000452760 1342 ntBASIC15.08■□□□□ 0
SRFBP1Q8NEF9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SRFBP1Q8NEF9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 AC132872.4-202ENST00000622924 2756 ntBASIC15.07■□□□□ 0
SRFBP1Q8NEF9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 AC105917.1-201ENST00000506637 2539 ntBASIC15.07■□□□□ 0
SRFBP1Q8NEF9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 AC097493.3-201ENST00000509725 367 ntBASIC15.07■□□□□ 0
SRFBP1Q8NEF9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 SDHAP3-202ENST00000515467 728 ntBASIC15.07■□□□□ 0
SRFBP1Q8NEF9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SRFBP1Q8NEF9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SRFBP1Q8NEF9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms