Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF220Q5VTB9 ST20-AS1-201ENST00000560255 4223 ntBASIC15.28■□□□□ 0.04
RNF220Q5VTB9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.28■□□□□ 0.04
RNF220Q5VTB9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 MIR4751-201ENST00000578027 74 ntBASIC15.28■□□□□ 0.04
RNF220Q5VTB9 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF220Q5VTB9 AGAP7P-201ENST00000582299 2062 ntBASIC15.28■□□□□ 0.04
RNF220Q5VTB9 AGAP14-201ENST00000624701 2060 ntBASIC15.28■□□□□ 0.04
RNF220Q5VTB9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 FGD5P1-202ENST00000614866 2498 ntBASIC15.27■□□□□ 0.04
RNF220Q5VTB9 AJ011931.1-201ENST00000618749 2492 ntBASIC15.27■□□□□ 0.04
RNF220Q5VTB9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 AC098831.1-202ENST00000438821 336 ntBASIC15.27■□□□□ 0.04
RNF220Q5VTB9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 AC093909.1-201ENST00000504731 1122 ntBASIC15.27■□□□□ 0.04
RNF220Q5VTB9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 KRT126P-201ENST00000549467 1181 ntBASIC15.27■□□□□ 0.04
RNF220Q5VTB9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 AL049840.3-201ENST00000602669 611 ntBASIC15.27■□□□□ 0.04
RNF220Q5VTB9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RNF220Q5VTB9 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 AL928921.2-201ENST00000641325 2442 ntBASIC15.27■□□□□ 0.03
RNF220Q5VTB9 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 SBF1P1-201ENST00000444527 5631 ntBASIC15.27■□□□□ 0.03
RNF220Q5VTB9 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 REXO1L1P-202ENST00000608646 1974 ntBASIC15.27■□□□□ 0.03
RNF220Q5VTB9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF220Q5VTB9 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms