Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHMP24386 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 FAM220BP-201ENST00000377689 816 ntBASIC14.81□□□□□ -0.04
CHMP24386 HLA-H-201ENST00000383620 1096 ntBASIC14.81□□□□□ -0.04
CHMP24386 SPDYE14P-201ENST00000442619 822 ntBASIC14.81□□□□□ -0.04
CHMP24386 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.81□□□□□ -0.04
CHMP24386 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CHMP24386 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.81□□□□□ -0.04
CHMP24386 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.81□□□□□ -0.04
CHMP24386 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.81□□□□□ -0.04
CHMP24386 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.81□□□□□ -0.04
CHMP24386 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.81□□□□□ -0.04
CHMP24386 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CHMP24386 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.81□□□□□ -0.04
CHMP24386 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.81□□□□□ -0.04
CHMP24386 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.81□□□□□ -0.04
CHMP24386 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP24386 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.81□□□□□ -0.04
CHMP24386 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP24386 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP24386 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP24386 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
CHMP24386 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP24386 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP24386 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.8□□□□□ -0.04
CHMP24386 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP24386 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP24386 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP24386 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP24386 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.8□□□□□ -0.04
CHMP24386 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP24386 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP24386 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP24386 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP24386 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP24386 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 FOXO1B-201ENST00000504678 1527 ntBASIC14.8□□□□□ -0.04
CHMP24386 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP24386 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP24386 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP24386 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP24386 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CHMP24386 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP24386 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CHMP24386 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHMP24386 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP24386 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP24386 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms