Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 AC084121.3-201ENST00000641716 218 ntBASIC13.63□□□□□ -0.23
EPHA1P21709 AL139011.1-202ENST00000642063 584 ntBASIC13.63□□□□□ -0.23
EPHA1P21709 AC105233.6-201ENST00000642093 218 ntBASIC13.63□□□□□ -0.23
EPHA1P21709 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.63□□□□□ -0.23
EPHA1P21709 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
EPHA1P21709 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.63□□□□□ -0.23
EPHA1P21709 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.63□□□□□ -0.23
EPHA1P21709 AP003680.1-201ENST00000598970 3660 ntBASIC13.63□□□□□ -0.23
EPHA1P21709 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.63□□□□□ -0.23
EPHA1P21709 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.63□□□□□ -0.23
EPHA1P21709 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.63□□□□□ -0.23
EPHA1P21709 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
EPHA1P21709 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
EPHA1P21709 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.62□□□□□ -0.23
EPHA1P21709 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
EPHA1P21709 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.62□□□□□ -0.23
EPHA1P21709 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.62□□□□□ -0.23
EPHA1P21709 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 AC005034.1-201ENST00000426657 489 ntBASIC13.62□□□□□ -0.23
EPHA1P21709 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.62□□□□□ -0.23
EPHA1P21709 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.62□□□□□ -0.23
EPHA1P21709 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.62□□□□□ -0.23
EPHA1P21709 SPDYE14P-201ENST00000442619 822 ntBASIC13.62□□□□□ -0.23
EPHA1P21709 AC002472.2-201ENST00000442739 958 ntBASIC13.62□□□□□ -0.23
EPHA1P21709 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
EPHA1P21709 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.62□□□□□ -0.23
EPHA1P21709 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.62□□□□□ -0.23
EPHA1P21709 SLC25A39P2-201ENST00000537614 270 ntBASIC13.62□□□□□ -0.23
EPHA1P21709 LINC01225-203ENST00000563550 1244 ntBASIC13.62□□□□□ -0.23
EPHA1P21709 RN7SL602P-201ENST00000578326 324 ntBASIC13.62□□□□□ -0.23
EPHA1P21709 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.62□□□□□ -0.23
EPHA1P21709 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.62□□□□□ -0.23
EPHA1P21709 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
EPHA1P21709 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.62□□□□□ -0.23
EPHA1P21709 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 SLC22A20-204ENST00000530038 1673 ntBASIC13.62□□□□□ -0.23
EPHA1P21709 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.62□□□□□ -0.23
EPHA1P21709 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
EPHA1P21709 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EPHA1P21709 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
EPHA1P21709 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.61□□□□□ -0.23
EPHA1P21709 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.61□□□□□ -0.23
EPHA1P21709 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.61□□□□□ -0.23
EPHA1P21709 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
EPHA1P21709 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
EPHA1P21709 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.61□□□□□ -0.23
EPHA1P21709 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
EPHA1P21709 AC015922.1-201ENST00000421102 1152 ntBASIC13.61□□□□□ -0.23
EPHA1P21709 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms