Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.22■□□□□ 0.19
ERCC2P18074 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.22■□□□□ 0.19
ERCC2P18074 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.22■□□□□ 0.19
ERCC2P18074 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.22■□□□□ 0.19
ERCC2P18074 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ERCC2P18074 RPL13P2-201ENST00000440687 659 ntBASIC16.22■□□□□ 0.19
ERCC2P18074 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 SLED1-202ENST00000512051 380 ntBASIC16.22■□□□□ 0.19
ERCC2P18074 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.22■□□□□ 0.19
ERCC2P18074 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.22■□□□□ 0.19
ERCC2P18074 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.22■□□□□ 0.19
ERCC2P18074 AC027796.2-201ENST00000575326 344 ntBASIC16.22■□□□□ 0.19
ERCC2P18074 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.22■□□□□ 0.19
ERCC2P18074 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.22■□□□□ 0.19
ERCC2P18074 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.22■□□□□ 0.19
ERCC2P18074 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.22■□□□□ 0.19
ERCC2P18074 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.22■□□□□ 0.19
ERCC2P18074 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 TMBIM7P-203ENST00000641617 1718 ntBASIC16.22■□□□□ 0.19
ERCC2P18074 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
ERCC2P18074 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC2P18074 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC2P18074 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ERCC2P18074 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ERCC2P18074 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
ERCC2P18074 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.21■□□□□ 0.19
ERCC2P18074 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.21■□□□□ 0.19
ERCC2P18074 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.21■□□□□ 0.19
ERCC2P18074 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.21■□□□□ 0.19
ERCC2P18074 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.21■□□□□ 0.19
ERCC2P18074 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.21■□□□□ 0.19
ERCC2P18074 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.21■□□□□ 0.19
ERCC2P18074 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 AC093214.1-201ENST00000511688 1107 ntBASIC16.21■□□□□ 0.19
ERCC2P18074 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.21■□□□□ 0.19
ERCC2P18074 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.21■□□□□ 0.19
ERCC2P18074 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
ERCC2P18074 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.21■□□□□ 0.19
ERCC2P18074 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.21■□□□□ 0.19
ERCC2P18074 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ERCC2P18074 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.21■□□□□ 0.19
ERCC2P18074 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.21■□□□□ 0.19
ERCC2P18074 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.21■□□□□ 0.19
ERCC2P18074 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ERCC2P18074 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC2P18074 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
ERCC2P18074 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ERCC2P18074 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.21■□□□□ 0.18
ERCC2P18074 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.21■□□□□ 0.18
ERCC2P18074 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.2■□□□□ 0.18
ERCC2P18074 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 AC022532.1-201ENST00000624563 1728 ntBASIC16.2■□□□□ 0.18
ERCC2P18074 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
ERCC2P18074 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC2P18074 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ERCC2P18074 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC2P18074 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ERCC2P18074 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ERCC2P18074 BASP1P1-201ENST00000430708 665 ntBASIC16.2■□□□□ 0.18
ERCC2P18074 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.2■□□□□ 0.18
ERCC2P18074 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.2■□□□□ 0.18
ERCC2P18074 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC2P18074 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.2■□□□□ 0.18
ERCC2P18074 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC2P18074 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC2P18074 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ERCC2P18074 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms