Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.54□□□□□ -0.08
THBS1P07996 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.54□□□□□ -0.08
THBS1P07996 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.54□□□□□ -0.08
THBS1P07996 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.54□□□□□ -0.08
THBS1P07996 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.54□□□□□ -0.08
THBS1P07996 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.54□□□□□ -0.08
THBS1P07996 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.54□□□□□ -0.08
THBS1P07996 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.54□□□□□ -0.08
THBS1P07996 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.53□□□□□ -0.08
THBS1P07996 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.53□□□□□ -0.08
THBS1P07996 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.53□□□□□ -0.08
THBS1P07996 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.53□□□□□ -0.08
THBS1P07996 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.53□□□□□ -0.08
THBS1P07996 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 RPL5P21-201ENST00000404620 815 ntBASIC14.53□□□□□ -0.08
THBS1P07996 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.53□□□□□ -0.08
THBS1P07996 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.53□□□□□ -0.08
THBS1P07996 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 HLA-J-203ENST00000494367 1087 ntBASIC14.53□□□□□ -0.08
THBS1P07996 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.53□□□□□ -0.08
THBS1P07996 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.53□□□□□ -0.08
THBS1P07996 AC132872.1-201ENST00000566986 1195 ntBASIC14.53□□□□□ -0.08
THBS1P07996 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.53□□□□□ -0.08
THBS1P07996 MIR6080-201ENST00000617359 66 ntBASIC14.53□□□□□ -0.08
THBS1P07996 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.53□□□□□ -0.08
THBS1P07996 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
THBS1P07996 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
THBS1P07996 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
THBS1P07996 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
THBS1P07996 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
THBS1P07996 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS1P07996 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
THBS1P07996 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.52□□□□□ -0.08
THBS1P07996 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
THBS1P07996 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS1P07996 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.52□□□□□ -0.08
THBS1P07996 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.52□□□□□ -0.08
THBS1P07996 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS1P07996 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
THBS1P07996 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
THBS1P07996 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms