Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.08■□□□□ 0
LCMT2O60294 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LCMT2O60294 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.08■□□□□ 0
LCMT2O60294 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.08■□□□□ 0
LCMT2O60294 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.08■□□□□ 0
LCMT2O60294 AC004790.1-201ENST00000612686 536 ntBASIC15.08■□□□□ 0
LCMT2O60294 AJ011932.1-201ENST00000621707 465 ntBASIC15.08■□□□□ 0
LCMT2O60294 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.08■□□□□ 0
LCMT2O60294 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.08■□□□□ 0
LCMT2O60294 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.08■□□□□ 0
LCMT2O60294 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.08■□□□□ 0
LCMT2O60294 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LCMT2O60294 AC020658.6-201ENST00000623564 1870 ntBASIC15.08■□□□□ 0
LCMT2O60294 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LCMT2O60294 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.07■□□□□ 0
LCMT2O60294 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.07■□□□□ 0
LCMT2O60294 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 MIR661-201ENST00000384842 89 ntBASIC15.07■□□□□ 0
LCMT2O60294 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 TSPY16P-201ENST00000449843 468 ntBASIC15.07■□□□□ 0
LCMT2O60294 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.07■□□□□ 0
LCMT2O60294 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.07■□□□□ 0
LCMT2O60294 SRD5A3P1-201ENST00000603021 949 ntBASIC15.07■□□□□ 0
LCMT2O60294 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.07■□□□□ 0
LCMT2O60294 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.07■□□□□ 0
LCMT2O60294 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 AC136621.1-201ENST00000624017 2304 ntBASIC15.07■□□□□ 0
LCMT2O60294 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LCMT2O60294 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LCMT2O60294 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.07■□□□□ 0
LCMT2O60294 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LCMT2O60294 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.06■□□□□ 0
LCMT2O60294 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.06■□□□□ 0
LCMT2O60294 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms