Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC28A2O43868 AC099568.2-201ENST00000609194 695 ntBASIC15.28■□□□□ 0.04
SLC28A2O43868 AC008738.7-201ENST00000609744 511 ntBASIC15.28■□□□□ 0.04
SLC28A2O43868 AC018529.1-201ENST00000613063 361 ntBASIC15.28■□□□□ 0.04
SLC28A2O43868 GPR182-203ENST00000622922 591 ntBASIC15.28■□□□□ 0.04
SLC28A2O43868 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC28A2O43868 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC28A2O43868 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC28A2O43868 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC28A2O43868 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC28A2O43868 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC28A2O43868 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC28A2O43868 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC28A2O43868 KRT8P44-201ENST00000441609 1350 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC28A2O43868 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC28A2O43868 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SLC28A2O43868 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC28A2O43868 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC28A2O43868 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC28A2O43868 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC28A2O43868 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC28A2O43868 DFFBP1-201ENST00000433250 979 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 TTTY23B-201ENST00000442790 549 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 AC009477.1-201ENST00000452936 217 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 HLA-V-204ENST00000476601 1289 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 AP005482.1-201ENST00000563722 1273 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SLC28A2O43868 MIR6787-201ENST00000616675 61 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.27■□□□□ 0.04
SLC28A2O43868 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC28A2O43868 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC28A2O43868 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC28A2O43868 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC28A2O43868 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC28A2O43868 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC28A2O43868 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC28A2O43868 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC28A2O43868 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC28A2O43868 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC28A2O43868 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SLC28A2O43868 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC28A2O43868 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC28A2O43868 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A2O43868 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC28A2O43868 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC28A2O43868 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC28A2O43868 MIR4259-201ENST00000584466 101 ntBASIC15.26■□□□□ 0.03
SLC28A2O43868 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC28A2O43868 AL512343.1-201ENST00000605837 169 ntBASIC15.26■□□□□ 0.03
SLC28A2O43868 AC008494.3-201ENST00000606615 944 ntBASIC15.26■□□□□ 0.03
SLC28A2O43868 COX11-210ENST00000639671 696 ntBASIC15.26■□□□□ 0.03
SLC28A2O43868 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A2O43868 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC28A2O43868 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms