Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.14■□□□□ 0.17
TRANK1O15050 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.14■□□□□ 0.17
TRANK1O15050 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRANK1O15050 AL353637.1-201ENST00000451571 732 ntBASIC16.14■□□□□ 0.17
TRANK1O15050 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRANK1O15050 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.14■□□□□ 0.17
TRANK1O15050 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.14■□□□□ 0.17
TRANK1O15050 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.14■□□□□ 0.17
TRANK1O15050 NAP1L6-202ENST00000641404 1222 ntBASIC16.14■□□□□ 0.17
TRANK1O15050 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.14■□□□□ 0.17
TRANK1O15050 PCDH8P1-201ENST00000428983 2773 ntBASIC16.14■□□□□ 0.17
TRANK1O15050 KRT8P29-201ENST00000420409 1371 ntBASIC16.14■□□□□ 0.17
TRANK1O15050 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRANK1O15050 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.13■□□□□ 0.17
TRANK1O15050 RN7SL67P-201ENST00000492147 296 ntBASIC16.13■□□□□ 0.17
TRANK1O15050 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRANK1O15050 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.13■□□□□ 0.17
TRANK1O15050 MIR6842-201ENST00000612539 65 ntBASIC16.13■□□□□ 0.17
TRANK1O15050 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRANK1O15050 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRANK1O15050 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.13■□□□□ 0.17
TRANK1O15050 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.13■□□□□ 0.17
TRANK1O15050 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.13■□□□□ 0.17
TRANK1O15050 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.13■□□□□ 0.17
TRANK1O15050 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.13■□□□□ 0.17
TRANK1O15050 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.13■□□□□ 0.17
TRANK1O15050 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRANK1O15050 KRT8P21-201ENST00000430398 1491 ntBASIC16.13■□□□□ 0.17
TRANK1O15050 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.13■□□□□ 0.17
TRANK1O15050 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.12■□□□□ 0.17
TRANK1O15050 AL139008.1-201ENST00000437894 228 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.12■□□□□ 0.17
TRANK1O15050 HLA-J-204ENST00000495278 958 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.12■□□□□ 0.17
TRANK1O15050 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.12■□□□□ 0.17
TRANK1O15050 MIR4649-201ENST00000582839 64 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 OR10B1P-201ENST00000601666 907 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRANK1O15050 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.12■□□□□ 0.17
TRANK1O15050 TBC1D3J-201ENST00000620719 1426 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.12■□□□□ 0.17
TRANK1O15050 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.12■□□□□ 0.17
TRANK1O15050 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.12■□□□□ 0.17
TRANK1O15050 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.12■□□□□ 0.17
TRANK1O15050 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.12■□□□□ 0.17
TRANK1O15050 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.12■□□□□ 0.17
TRANK1O15050 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 AC138466.3-201ENST00000619983 221 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.12■□□□□ 0.17
TRANK1O15050 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.12■□□□□ 0.17
TRANK1O15050 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRANK1O15050 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRANK1O15050 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.12■□□□□ 0.17
TRANK1O15050 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRANK1O15050 DUX4L47-201ENST00000566374 394 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 MIR4313-201ENST00000580760 101 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 AC020922.3-201ENST00000595064 547 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.12■□□□□ 0.17
TRANK1O15050 AC105137.3-201ENST00000617588 984 ntBASIC16.12■□□□□ 0.17
TRANK1O15050 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.11■□□□□ 0.17
TRANK1O15050 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRANK1O15050 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRANK1O15050 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRANK1O15050 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRANK1O15050 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRANK1O15050 AC022211.2-201ENST00000585075 2527 ntBASIC16.11■□□□□ 0.17
TRANK1O15050 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRANK1O15050 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms