Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 LINC02447-202ENST00000501888 2146 ntBASIC18.82■□□□□ 0.6
RTN4Q9NQC3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AC091607.1-201ENST00000490318 1060 ntBASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AC022616.7-201ENST00000525383 220 ntBASIC18.82■□□□□ 0.6
RTN4Q9NQC3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 AL034417.4-201ENST00000641354 2101 ntBASIC18.82■□□□□ 0.6
RTN4Q9NQC3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC18.82■□□□□ 0.6
RTN4Q9NQC3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 CDC14C-201ENST00000428251 1719 ntBASIC18.81■□□□□ 0.6
RTN4Q9NQC3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 BEND3P1-201ENST00000421591 1944 ntBASIC18.81■□□□□ 0.6
RTN4Q9NQC3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 AC003669.1-201ENST00000334569 611 ntBASIC18.81■□□□□ 0.6
RTN4Q9NQC3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 AC211429.1-201ENST00000415277 523 ntBASIC18.81■□□□□ 0.6
RTN4Q9NQC3 AC246785.2-201ENST00000432512 513 ntBASIC18.81■□□□□ 0.6
RTN4Q9NQC3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 AC006064.1-201ENST00000499202 560 ntTSL 4 BASIC18.81■□□□□ 0.6
RTN4Q9NQC3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms