Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 RARRES2P8-201ENST00000566335 367 ntBASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 AL138918.1-201ENST00000568306 659 ntBASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 AC013268.4-201ENST00000637413 2228 ntBASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 FAM58CP-201ENST00000435741 640 ntBASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 PGAM5P1-201ENST00000518923 814 ntBASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AC040169.1-201ENST00000565382 521 ntBASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AP003680.1-201ENST00000598970 3660 ntBASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AC112504.1-201ENST00000623415 1841 ntBASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AC069224.1-201ENST00000566372 1715 ntBASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 AL589702.1-201ENST00000641229 1509 ntBASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms