Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AC105233.2-201ENST00000523697 349 ntBASIC16.27■□□□□ 0.2
SCG3Q8WXD2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AF228730.5-201ENST00000530288 346 ntBASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AC073389.1-201ENST00000595595 795 ntBASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AJ011932.1-201ENST00000621707 465 ntBASIC16.27■□□□□ 0.2
SCG3Q8WXD2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AC073439.1-201ENST00000624121 1774 ntBASIC16.27■□□□□ 0.2
SCG3Q8WXD2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 AC138035.3-201ENST00000622706 2791 ntBASIC16.27■□□□□ 0.2
SCG3Q8WXD2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.27■□□□□ 0.19
SCG3Q8WXD2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 LINC02447-202ENST00000501888 2146 ntBASIC16.27■□□□□ 0.19
SCG3Q8WXD2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCG3Q8WXD2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 CDC14C-201ENST00000428251 1719 ntBASIC16.26■□□□□ 0.19
SCG3Q8WXD2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 SPDYE14P-201ENST00000442619 822 ntBASIC16.26■□□□□ 0.19
SCG3Q8WXD2 AL512638.1-201ENST00000457493 794 ntBASIC16.26■□□□□ 0.19
SCG3Q8WXD2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 IGHV3-42-201ENST00000520410 361 ntBASIC16.26■□□□□ 0.19
SCG3Q8WXD2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.26■□□□□ 0.19
SCG3Q8WXD2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCG3Q8WXD2 AC008677.1-201ENST00000519230 1561 ntBASIC16.26■□□□□ 0.19
SCG3Q8WXD2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AC069224.1-201ENST00000566372 1715 ntBASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms