Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 MRPS18AP1-201ENST00000414458 589 ntBASIC16.84■□□□□ 0.29
LMO3Q8TAP4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 AL391069.4-201ENST00000609583 481 ntBASIC16.84■□□□□ 0.29
LMO3Q8TAP4 AC008738.7-201ENST00000609744 511 ntBASIC16.84■□□□□ 0.29
LMO3Q8TAP4 AC004840.1-201ENST00000636359 365 ntBASIC16.84■□□□□ 0.29
LMO3Q8TAP4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 AC148477.4-201ENST00000613430 1793 ntBASIC16.84■□□□□ 0.29
LMO3Q8TAP4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
LMO3Q8TAP4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LMO3Q8TAP4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LMO3Q8TAP4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 AL121723.1-201ENST00000445194 1519 ntBASIC16.83■□□□□ 0.28
LMO3Q8TAP4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 SPDYE18-201ENST00000510091 1050 ntBASIC16.83■□□□□ 0.28
LMO3Q8TAP4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.83■□□□□ 0.28
LMO3Q8TAP4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.83■□□□□ 0.28
LMO3Q8TAP4 AL390754.1-201ENST00000619088 582 ntBASIC16.83■□□□□ 0.28
LMO3Q8TAP4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 CICP11-201ENST00000434745 2827 ntBASIC16.83■□□□□ 0.28
LMO3Q8TAP4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
LMO3Q8TAP4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 BTBD7P1-201ENST00000447253 1453 ntBASIC16.82■□□□□ 0.28
LMO3Q8TAP4 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.82■□□□□ 0.28
LMO3Q8TAP4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 AL589987.1-201ENST00000453380 819 ntBASIC16.82■□□□□ 0.28
LMO3Q8TAP4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 AC005498.2-205ENST00000593218 784 ntBASIC16.82■□□□□ 0.28
LMO3Q8TAP4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 AC004790.1-201ENST00000612686 536 ntBASIC16.82■□□□□ 0.28
LMO3Q8TAP4 AC106028.4-201ENST00000614509 607 ntBASIC16.82■□□□□ 0.28
LMO3Q8TAP4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 TCAF2P1-201ENST00000291129 2421 ntBASIC16.82■□□□□ 0.28
LMO3Q8TAP4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms