Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 FER1L4-210ENST00000615531 5998 ntBASIC14.31□□□□□ -0.12
ATG4DQ86TL0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 UGT1A2P-201ENST00000454886 866 ntBASIC14.31□□□□□ -0.12
ATG4DQ86TL0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 SPDYE12P-201ENST00000618416 771 ntBASIC14.31□□□□□ -0.12
ATG4DQ86TL0 AL390754.1-201ENST00000619088 582 ntBASIC14.31□□□□□ -0.12
ATG4DQ86TL0 AL033527.5-202ENST00000641632 1098 ntBASIC14.31□□□□□ -0.12
ATG4DQ86TL0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ATG4DQ86TL0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 IGHV3-42-201ENST00000520410 361 ntBASIC14.3□□□□□ -0.12
ATG4DQ86TL0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATG4DQ86TL0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms