Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 AC023024.2-201ENST00000623561 1993 ntBASIC13.8□□□□□ -0.2
CLDN12P56749 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLDN12P56749 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 AC148477.4-201ENST00000613430 1793 ntBASIC13.8□□□□□ -0.2
CLDN12P56749 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CLDN12P56749 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLDN12P56749 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 WASH6P-202ENST00000359512 1437 ntBASIC13.8□□□□□ -0.2
CLDN12P56749 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN12P56749 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN12P56749 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN12P56749 AC126365.1-201ENST00000578585 1514 ntBASIC13.8□□□□□ -0.2
CLDN12P56749 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
CLDN12P56749 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 GPX1P2-201ENST00000429271 606 ntBASIC13.79□□□□□ -0.2
CLDN12P56749 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.79□□□□□ -0.2
CLDN12P56749 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.79□□□□□ -0.2
CLDN12P56749 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 AC073648.2-201ENST00000510116 352 ntBASIC13.79□□□□□ -0.2
CLDN12P56749 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 AC105339.3-201ENST00000560043 636 ntBASIC13.79□□□□□ -0.2
CLDN12P56749 AC012640.2-201ENST00000561606 901 ntBASIC13.79□□□□□ -0.2
CLDN12P56749 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 AL078644.1-201ENST00000609881 752 ntBASIC13.79□□□□□ -0.2
CLDN12P56749 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN12P56749 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLDN12P56749 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN12P56749 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms