Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AL162726.2-201ENST00000438986 1017 ntBASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AL450472.2-201ENST00000603663 1156 ntBASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AC133539.2-201ENST00000604757 467 ntBASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AL513477.1-201ENST00000602865 2407 ntBASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 AC136604.1-201ENST00000418535 575 ntBASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 FAM86LP-201ENST00000478302 853 ntBASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 RPL13AP25-201ENST00000484130 612 ntBASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 SLED1-202ENST00000512051 380 ntBASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40ALP0C0E4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 AL365203.3-201ENST00000609742 2057 ntBASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 KRT8P22-201ENST00000562317 1415 ntBASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAB40ALP0C0E4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms