Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC10.68□□□□□ -0.7
SNCGO76070 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC10.68□□□□□ -0.7
SNCGO76070 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.68□□□□□ -0.7
SNCGO76070 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC10.68□□□□□ -0.7
SNCGO76070 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SNCGO76070 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC10.68□□□□□ -0.7
SNCGO76070 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SNCGO76070 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
SNCGO76070 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC10.68□□□□□ -0.7
SNCGO76070 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SNCGO76070 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SNCGO76070 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.67□□□□□ -0.7
SNCGO76070 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SNCGO76070 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 ESRRAP1-201ENST00000400596 1257 ntBASIC10.67□□□□□ -0.7
SNCGO76070 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC10.67□□□□□ -0.7
SNCGO76070 AC069152.1-201ENST00000438030 544 ntBASIC10.67□□□□□ -0.7
SNCGO76070 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC10.67□□□□□ -0.7
SNCGO76070 UBE2SP1-201ENST00000450587 669 ntBASIC10.67□□□□□ -0.7
SNCGO76070 PON3-205ENST00000451904 1053 ntTSL 3 BASIC10.67□□□□□ -0.7
SNCGO76070 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC10.67□□□□□ -0.7
SNCGO76070 AC024243.1-201ENST00000609234 778 ntBASIC10.67□□□□□ -0.7
SNCGO76070 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 FUT8-AS1-201ENST00000621019 1521 ntBASIC10.67□□□□□ -0.7
SNCGO76070 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 KCND2-201ENST00000331113 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC10.67□□□□□ -0.7
SNCGO76070 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC10.67□□□□□ -0.7
SNCGO76070 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC10.67□□□□□ -0.7
SNCGO76070 CSPG4P12-201ENST00000558282 4853 ntBASIC10.67□□□□□ -0.7
SNCGO76070 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC10.67□□□□□ -0.7
SNCGO76070 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC10.67□□□□□ -0.7
SNCGO76070 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SNCGO76070 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SNCGO76070 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC10.66□□□□□ -0.7
SNCGO76070 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
SNCGO76070 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC10.66□□□□□ -0.7
SNCGO76070 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SNCGO76070 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms