Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 AL671277.1-201ENST00000429656 993 ntBASIC16.8■□□□□ 0.28
RCCD1A6NED2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 LINC01225-203ENST00000563550 1244 ntBASIC16.8■□□□□ 0.28
RCCD1A6NED2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCCD1A6NED2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.8■□□□□ 0.28
RCCD1A6NED2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 AZGP1P1-201ENST00000411909 902 ntBASIC16.79■□□□□ 0.28
RCCD1A6NED2 AC026396.1-201ENST00000419388 421 ntBASIC16.79■□□□□ 0.28
RCCD1A6NED2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 AP000842.3-202ENST00000569238 1080 ntBASIC16.79■□□□□ 0.28
RCCD1A6NED2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 AC091812.2-201ENST00000619081 385 ntBASIC16.79■□□□□ 0.28
RCCD1A6NED2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RCCD1A6NED2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.79■□□□□ 0.28
RCCD1A6NED2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.78■□□□□ 0.28
RCCD1A6NED2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 SPCS2P4-201ENST00000436160 681 ntBASIC16.78■□□□□ 0.28
RCCD1A6NED2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.78■□□□□ 0.28
RCCD1A6NED2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 AC092902.6-201ENST00000641783 218 ntBASIC16.78■□□□□ 0.28
RCCD1A6NED2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCCD1A6NED2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms