Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 MIR648-201ENST00000385046 94 ntBASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 MIR4492-201ENST00000581627 80 ntBASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 MPDU1-223ENST00000582151 728 ntBASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 AC131009.4-201ENST00000624048 1740 ntBASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DDX49Q9Y6V7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 FO538757.1-201ENST00000623083 1397 ntBASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 TUBB3P1-201ENST00000405796 1332 ntBASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 MIR943-201ENST00000401286 94 ntBASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 AC109635.5-201ENST00000533593 962 ntBASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 AC069262.1-201ENST00000539058 672 ntBASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 AL161645.1-201ENST00000622716 1255 ntBASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
DDX49Q9Y6V7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX49Q9Y6V7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DDX49Q9Y6V7 AL161772.1-201ENST00000610494 4412 ntBASIC19.05■□□□□ 0.64
DDX49Q9Y6V7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
DDX49Q9Y6V7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDX49Q9Y6V7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDX49Q9Y6V7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms