Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 AL133267.1-201ENST00000398220 340 ntBASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 AC005498.2-205ENST00000593218 784 ntBASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 AC004461.2-201ENST00000629517 803 ntBASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 AC084364.1-201ENST00000551967 1556 ntBASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 AC022144.1-201ENST00000602255 1580 ntBASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 C18orf15-201ENST00000623680 2534 ntBASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 RPL5P21-201ENST00000404620 815 ntBASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 CYMP-203ENST00000474680 1263 ntBASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHGC3Q9UN70 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 AL109954.1-202ENST00000564051 2148 ntBASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGC3Q9UN70 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms