Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 AC093214.1-201ENST00000511688 1107 ntBASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 AC084364.1-201ENST00000551967 1556 ntBASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 KRT8P44-201ENST00000441609 1350 ntBASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 BTBD7P1-201ENST00000447253 1453 ntBASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 AC015910.1-201ENST00000579400 975 ntBASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BLOC1S4Q9NUP1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 FAM8A3P-201ENST00000427218 844 ntBASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 AL391069.4-201ENST00000609583 481 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms