Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 AC009090.5-201ENST00000624886 2285 ntBASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
CCM2LQ9NUG4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 AC018845.2-201ENST00000568326 409 ntBASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 CICP4-201ENST00000447359 2812 ntBASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 AC068587.6-202ENST00000641839 5619 ntBASIC15.11■□□□□ 0.01
CCM2LQ9NUG4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 ELL2P1-201ENST00000413990 1906 ntBASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCM2LQ9NUG4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms