Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 AC005702.4-201ENST00000618393 416 ntBASIC16.73■□□□□ 0.27
CYLDQ9NQC7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CYLDQ9NQC7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 COX20P2-201ENST00000452636 358 ntBASIC16.72■□□□□ 0.27
CYLDQ9NQC7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 AC244517.3-201ENST00000616254 1235 ntBASIC16.72■□□□□ 0.27
CYLDQ9NQC7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CYLDQ9NQC7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 AC018892.3-201ENST00000623986 2499 ntBASIC16.71■□□□□ 0.27
CYLDQ9NQC7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.71■□□□□ 0.27
CYLDQ9NQC7 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.71■□□□□ 0.27
CYLDQ9NQC7 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.71■□□□□ 0.27
CYLDQ9NQC7 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.71■□□□□ 0.27
CYLDQ9NQC7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CYLDQ9NQC7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms