Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 AC007686.3-201ENST00000619017 3487 ntBASIC19.48■□□□□ 0.71
UPF2Q9HAU5 AC009090.5-201ENST00000624886 2285 ntBASIC19.48■□□□□ 0.71
UPF2Q9HAU5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 KRT8P44-201ENST00000441609 1350 ntBASIC19.47■□□□□ 0.71
UPF2Q9HAU5 AC023908.3-201ENST00000564211 3047 ntBASIC19.47■□□□□ 0.71
UPF2Q9HAU5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 AC243562.2-201ENST00000561247 970 ntBASIC19.47■□□□□ 0.71
UPF2Q9HAU5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPF2Q9HAU5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 GPX1P2-201ENST00000429271 606 ntBASIC19.46■□□□□ 0.71
UPF2Q9HAU5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 SNX18-202ENST00000343017 3140 ntBASIC19.46■□□□□ 0.71
UPF2Q9HAU5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPF2Q9HAU5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 AC026748.1-201ENST00000624349 3251 ntBASIC19.45■□□□□ 0.7
UPF2Q9HAU5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 MROH4P-201ENST00000431302 1578 ntBASIC19.45■□□□□ 0.7
UPF2Q9HAU5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPF2Q9HAU5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms