Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 AL049829.1-201ENST00000465411 156 ntBASIC14.28□□□□□ -0.12
USB1Q9BQ65 FOXO1B-201ENST00000504678 1527 ntBASIC14.28□□□□□ -0.12
USB1Q9BQ65 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 IGHV3-42-201ENST00000520410 361 ntBASIC14.28□□□□□ -0.12
USB1Q9BQ65 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 AC005498.2-205ENST00000593218 784 ntBASIC14.28□□□□□ -0.12
USB1Q9BQ65 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.28□□□□□ -0.12
USB1Q9BQ65 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.28□□□□□ -0.12
USB1Q9BQ65 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
USB1Q9BQ65 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
USB1Q9BQ65 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.27□□□□□ -0.12
USB1Q9BQ65 CETN4P-206ENST00000642099 2168 ntBASIC14.27□□□□□ -0.12
USB1Q9BQ65 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
USB1Q9BQ65 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.27□□□□□ -0.12
USB1Q9BQ65 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.27□□□□□ -0.12
USB1Q9BQ65 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
USB1Q9BQ65 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 AC097493.3-201ENST00000509725 367 ntBASIC14.27□□□□□ -0.13
USB1Q9BQ65 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 AC087272.1-201ENST00000523624 533 ntBASIC14.27□□□□□ -0.13
USB1Q9BQ65 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
USB1Q9BQ65 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.27□□□□□ -0.13
USB1Q9BQ65 GGT4P-201ENST00000623672 1708 ntBASIC14.27□□□□□ -0.13
USB1Q9BQ65 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.26□□□□□ -0.13
USB1Q9BQ65 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 FO538757.1-201ENST00000623083 1397 ntBASIC14.26□□□□□ -0.13
USB1Q9BQ65 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 TREML5P-201ENST00000421694 576 ntBASIC14.26□□□□□ -0.13
USB1Q9BQ65 FAM207CP-201ENST00000443486 507 ntBASIC14.26□□□□□ -0.13
USB1Q9BQ65 CT45A11P-201ENST00000448043 1134 ntBASIC14.26□□□□□ -0.13
USB1Q9BQ65 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.26□□□□□ -0.13
USB1Q9BQ65 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
USB1Q9BQ65 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC14.26□□□□□ -0.13
USB1Q9BQ65 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms