Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 AC105206.1-202ENST00000314927 2368 ntBASIC10.53□□□□□ -0.72
LITAFQ99732 PPT1-213ENST00000641319 2388 ntBASIC10.53□□□□□ -0.72
LITAFQ99732 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LITAFQ99732 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.53□□□□□ -0.72
LITAFQ99732 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LITAFQ99732 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LITAFQ99732 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LITAFQ99732 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LITAFQ99732 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
LITAFQ99732 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
LITAFQ99732 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LITAFQ99732 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LITAFQ99732 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LITAFQ99732 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC10.52□□□□□ -0.72
LITAFQ99732 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LITAFQ99732 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.52□□□□□ -0.73
LITAFQ99732 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC10.52□□□□□ -0.73
LITAFQ99732 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC10.52□□□□□ -0.73
LITAFQ99732 RNU1-129P-201ENST00000384064 167 ntBASIC10.52□□□□□ -0.73
LITAFQ99732 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
LITAFQ99732 IGHV3-47-201ENST00000425060 335 ntBASIC10.52□□□□□ -0.73
LITAFQ99732 THAP5-204ENST00000438865 868 ntTSL 2 BASIC10.52□□□□□ -0.73
LITAFQ99732 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC10.52□□□□□ -0.73
LITAFQ99732 ARTN-206ENST00000472435 402 ntTSL 3 BASIC10.52□□□□□ -0.73
LITAFQ99732 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC10.52□□□□□ -0.73
LITAFQ99732 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
LITAFQ99732 PNN-202ENST00000553331 656 ntTSL 3 BASIC10.52□□□□□ -0.73
LITAFQ99732 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC10.52□□□□□ -0.73
LITAFQ99732 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC10.52□□□□□ -0.73
LITAFQ99732 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC10.52□□□□□ -0.73
LITAFQ99732 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC10.52□□□□□ -0.73
LITAFQ99732 U1.21-201ENST00000580816 167 ntBASIC10.52□□□□□ -0.73
LITAFQ99732 AC004706.3-202ENST00000621574 984 ntBASIC10.52□□□□□ -0.73
LITAFQ99732 CYP51A1P2-201ENST00000419457 1499 ntBASIC10.52□□□□□ -0.73
LITAFQ99732 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
LITAFQ99732 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.52□□□□□ -0.73
LITAFQ99732 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 AC018529.2-202ENST00000611482 3087 ntBASIC10.52□□□□□ -0.73
LITAFQ99732 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
LITAFQ99732 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.52□□□□□ -0.73
LITAFQ99732 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LITAFQ99732 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LITAFQ99732 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.51□□□□□ -0.73
LITAFQ99732 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LITAFQ99732 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms