Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
NDNQ99608 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.93■□□□□ 0.14
NDNQ99608 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDNQ99608 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDNQ99608 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NDNQ99608 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NDNQ99608 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDNQ99608 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.93■□□□□ 0.14
NDNQ99608 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NDNQ99608 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDNQ99608 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NDNQ99608 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NDNQ99608 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDNQ99608 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NDNQ99608 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.92■□□□□ 0.14
NDNQ99608 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.92■□□□□ 0.14
NDNQ99608 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NDNQ99608 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NDNQ99608 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
NDNQ99608 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.92■□□□□ 0.14
NDNQ99608 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 AC139749.1-202ENST00000617529 3139 ntBASIC15.92■□□□□ 0.14
NDNQ99608 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 FAM220BP-201ENST00000377689 816 ntBASIC15.92■□□□□ 0.14
NDNQ99608 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.92■□□□□ 0.14
NDNQ99608 HLA-H-201ENST00000383620 1096 ntBASIC15.92■□□□□ 0.14
NDNQ99608 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 MKNK2P1-201ENST00000437526 628 ntBASIC15.92■□□□□ 0.14
NDNQ99608 ACTG1P14-201ENST00000446382 1122 ntBASIC15.92■□□□□ 0.14
NDNQ99608 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.92■□□□□ 0.14
NDNQ99608 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.92■□□□□ 0.14
NDNQ99608 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.92■□□□□ 0.14
NDNQ99608 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.92■□□□□ 0.14
NDNQ99608 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.92■□□□□ 0.14
NDNQ99608 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.92■□□□□ 0.14
NDNQ99608 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.92■□□□□ 0.14
NDNQ99608 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 AC020658.6-201ENST00000623564 1870 ntBASIC15.92■□□□□ 0.14
NDNQ99608 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NDNQ99608 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NDNQ99608 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
NDNQ99608 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NDNQ99608 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NDNQ99608 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NDNQ99608 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NDNQ99608 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NDNQ99608 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.91■□□□□ 0.14
NDNQ99608 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NDNQ99608 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NDNQ99608 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
NDNQ99608 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NDNQ99608 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.91■□□□□ 0.14
NDNQ99608 CEND1P1-201ENST00000451006 455 ntBASIC15.91■□□□□ 0.14
NDNQ99608 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.91■□□□□ 0.14
NDNQ99608 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NDNQ99608 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.91■□□□□ 0.14
NDNQ99608 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.91■□□□□ 0.14
NDNQ99608 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.91■□□□□ 0.14
NDNQ99608 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.91■□□□□ 0.14
NDNQ99608 ELL2P1-201ENST00000413990 1906 ntBASIC15.91■□□□□ 0.14
NDNQ99608 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
NDNQ99608 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NDNQ99608 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.91■□□□□ 0.14
NDNQ99608 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
NDNQ99608 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms