Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 AC138035.3-201ENST00000622706 2791 ntBASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMARCC2Q8TAQ2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 AL080243.2-201ENST00000418783 582 ntBASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 AC004890.2-204ENST00000481968 304 ntBASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 MIR4745-201ENST00000577608 62 ntBASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.48■□□□□ 0.55
SMARCC2Q8TAQ2 AC006058.4-201ENST00000624016 1670 ntBASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 AL607033.1-201ENST00000623900 1599 ntBASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 C18orf15-201ENST00000623680 2534 ntBASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 TSSK5P-201ENST00000423978 907 ntBASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMARCC2Q8TAQ2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms