Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 FO393414.2-201ENST00000405153 598 ntBASIC17.19■□□□□ 0.34
VPS52Q8N1B4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 AC025048.3-201ENST00000590609 569 ntBASIC17.19■□□□□ 0.34
VPS52Q8N1B4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 MIR4321-201ENST00000592276 80 ntBASIC17.19■□□□□ 0.34
VPS52Q8N1B4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 AC005702.4-201ENST00000618393 416 ntBASIC17.19■□□□□ 0.34
VPS52Q8N1B4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 CYP4F24P-201ENST00000586049 1580 ntBASIC17.19■□□□□ 0.34
VPS52Q8N1B4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS52Q8N1B4 LINC01144-201ENST00000626198 1710 ntBASIC17.18■□□□□ 0.34
VPS52Q8N1B4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 AC092364.2-201ENST00000596710 2692 ntBASIC17.18■□□□□ 0.34
VPS52Q8N1B4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.18■□□□□ 0.34
VPS52Q8N1B4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 MIR658-201ENST00000385210 100 ntBASIC17.18■□□□□ 0.34
VPS52Q8N1B4 RPS2P32-201ENST00000439199 892 ntBASIC17.18■□□□□ 0.34
VPS52Q8N1B4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS52Q8N1B4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 ME2P1-201ENST00000426028 1970 ntBASIC17.17■□□□□ 0.34
VPS52Q8N1B4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms