Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 CR383656.12-201ENST00000549567 513 ntBASIC15.19■□□□□ 0.02
RAB43Q86YS6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 AC061975.2-201ENST00000581722 295 ntBASIC15.19■□□□□ 0.02
RAB43Q86YS6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 AL132655.2-201ENST00000596276 594 ntBASIC15.19■□□□□ 0.02
RAB43Q86YS6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB43Q86YS6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB43Q86YS6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.18■□□□□ 0.02
RAB43Q86YS6 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.18■□□□□ 0.02
RAB43Q86YS6 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.18■□□□□ 0.02
RAB43Q86YS6 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.18■□□□□ 0.02
RAB43Q86YS6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB43Q86YS6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB43Q86YS6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 PCGF3-213ENST00000620529 1899 ntBASIC15.17■□□□□ 0.02
RAB43Q86YS6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB43Q86YS6 AL353779.1-201ENST00000434793 351 ntBASIC15.17■□□□□ 0.02
RAB43Q86YS6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB43Q86YS6 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms