Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 MIR770-201ENST00000390219 98 ntBASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 IGHV3-42-201ENST00000520410 361 ntBASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 AC015911.4-201ENST00000588022 1070 ntBASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP1BQ7LBR1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 AC092364.2-201ENST00000596710 2692 ntBASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 GGT4P-201ENST00000623672 1708 ntBASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 AC008677.1-201ENST00000519230 1561 ntBASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 MIR4453-201ENST00000584019 89 ntBASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 HLA-A-202ENST00000376806 1854 ntBASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 U82695.1-201ENST00000635752 1889 ntBASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP1BQ7LBR1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.68□□□□□ -0.06
CHMP1BQ7LBR1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms