Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL607033.1-201ENST00000623900 1599 ntBASIC14.43□□□□□ -0.1
HMGA2P52926 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HMGA2P52926 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HMGA2P52926 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGA2P52926 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGA2P52926 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGA2P52926 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGA2P52926 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGA2P52926 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 HLA-H-201ENST00000383620 1096 ntBASIC14.42□□□□□ -0.1
HMGA2P52926 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HMGA2P52926 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.42□□□□□ -0.1
HMGA2P52926 AL671277.1-201ENST00000429656 993 ntBASIC14.42□□□□□ -0.1
HMGA2P52926 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGA2P52926 FAM86C2P-203ENST00000528684 1004 ntBASIC14.42□□□□□ -0.1
HMGA2P52926 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.42□□□□□ -0.1
HMGA2P52926 AL135744.1-201ENST00000565098 629 ntBASIC14.42□□□□□ -0.1
HMGA2P52926 SLC25A6P4-201ENST00000586535 553 ntBASIC14.42□□□□□ -0.1
HMGA2P52926 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGA2P52926 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGA2P52926 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGA2P52926 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HMGA2P52926 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HMGA2P52926 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.42□□□□□ -0.1
HMGA2P52926 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGA2P52926 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGA2P52926 HLA-A-201ENST00000376802 1334 ntBASIC14.41□□□□□ -0.1
HMGA2P52926 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGA2P52926 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGA2P52926 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGA2P52926 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.41□□□□□ -0.1
HMGA2P52926 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGA2P52926 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGA2P52926 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGA2P52926 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGA2P52926 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.41□□□□□ -0.1
HMGA2P52926 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGA2P52926 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGA2P52926 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.41□□□□□ -0.1
HMGA2P52926 LINC01225-203ENST00000563550 1244 ntBASIC14.41□□□□□ -0.1
HMGA2P52926 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGA2P52926 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGA2P52926 AL513190.1-201ENST00000621254 727 ntBASIC14.41□□□□□ -0.1
HMGA2P52926 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMGA2P52926 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGA2P52926 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGA2P52926 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGA2P52926 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGA2P52926 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HMGA2P52926 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
HMGA2P52926 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGA2P52926 AC104109.2-201ENST00000602919 1418 ntBASIC14.41□□□□□ -0.1
HMGA2P52926 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGA2P52926 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms