Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.58■□□□□ 0.08
GTF2A1P52655 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.58■□□□□ 0.08
GTF2A1P52655 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.58■□□□□ 0.08
GTF2A1P52655 Z99916.2-201ENST00000604037 246 ntBASIC15.58■□□□□ 0.08
GTF2A1P52655 BX324167.2-201ENST00000623717 3316 ntBASIC15.58■□□□□ 0.08
GTF2A1P52655 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GTF2A1P52655 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
GTF2A1P52655 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GTF2A1P52655 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.58■□□□□ 0.08
GTF2A1P52655 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.58■□□□□ 0.08
GTF2A1P52655 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC15.58■□□□□ 0.08
GTF2A1P52655 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
GTF2A1P52655 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GTF2A1P52655 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
GTF2A1P52655 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 AC092919.2-201ENST00000623631 1645 ntBASIC15.57■□□□□ 0.08
GTF2A1P52655 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GTF2A1P52655 AC112693.3-201ENST00000624819 1983 ntBASIC15.57■□□□□ 0.08
GTF2A1P52655 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.57■□□□□ 0.08
GTF2A1P52655 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
GTF2A1P52655 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 KRT18P65-201ENST00000439811 1286 ntBASIC15.57■□□□□ 0.08
GTF2A1P52655 AC113404.2-201ENST00000507884 177 ntBASIC15.57■□□□□ 0.08
GTF2A1P52655 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.57■□□□□ 0.08
GTF2A1P52655 C2orf69P3-201ENST00000565542 1120 ntBASIC15.57■□□□□ 0.08
GTF2A1P52655 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 AC092865.7-201ENST00000641832 219 ntBASIC15.57■□□□□ 0.08
GTF2A1P52655 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
GTF2A1P52655 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
GTF2A1P52655 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.57■□□□□ 0.08
GTF2A1P52655 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.57■□□□□ 0.08
GTF2A1P52655 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GTF2A1P52655 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GTF2A1P52655 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2A1P52655 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2A1P52655 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2A1P52655 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
GTF2A1P52655 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.56■□□□□ 0.08
GTF2A1P52655 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.56■□□□□ 0.08
GTF2A1P52655 GCSHP5-201ENST00000443090 522 ntBASIC15.56■□□□□ 0.08
GTF2A1P52655 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.56■□□□□ 0.08
GTF2A1P52655 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
GTF2A1P52655 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2A1P52655 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2A1P52655 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GTF2A1P52655 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GTF2A1P52655 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2A1P52655 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.56■□□□□ 0.08
GTF2A1P52655 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2A1P52655 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.56■□□□□ 0.08
GTF2A1P52655 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GTF2A1P52655 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GTF2A1P52655 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2A1P52655 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms