Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.19■□□□□ 0.02
HLCSP50747 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.19■□□□□ 0.02
HLCSP50747 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.19■□□□□ 0.02
HLCSP50747 AC051619.7-201ENST00000568314 623 ntBASIC15.19■□□□□ 0.02
HLCSP50747 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.19■□□□□ 0.02
HLCSP50747 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.19■□□□□ 0.02
HLCSP50747 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HLCSP50747 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLCSP50747 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HLCSP50747 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.19■□□□□ 0.02
HLCSP50747 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.19■□□□□ 0.02
HLCSP50747 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
HLCSP50747 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLCSP50747 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.18■□□□□ 0.02
HLCSP50747 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.18■□□□□ 0.02
HLCSP50747 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 AC142381.1-201ENST00000426099 345 ntBASIC15.18■□□□□ 0.02
HLCSP50747 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.18■□□□□ 0.02
HLCSP50747 KLF2P3-201ENST00000451977 1087 ntBASIC15.18■□□□□ 0.02
HLCSP50747 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.18■□□□□ 0.02
HLCSP50747 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.18■□□□□ 0.02
HLCSP50747 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.18■□□□□ 0.02
HLCSP50747 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.18■□□□□ 0.02
HLCSP50747 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 CICP4-201ENST00000447359 2812 ntBASIC15.18■□□□□ 0.02
HLCSP50747 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HLCSP50747 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
HLCSP50747 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLCSP50747 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.17■□□□□ 0.02
HLCSP50747 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.17■□□□□ 0.02
HLCSP50747 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.17■□□□□ 0.02
HLCSP50747 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.17■□□□□ 0.02
HLCSP50747 AC104581.4-201ENST00000623126 3052 ntBASIC15.17■□□□□ 0.02
HLCSP50747 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.17■□□□□ 0.02
HLCSP50747 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HLCSP50747 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLCSP50747 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLCSP50747 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.17■□□□□ 0.02
HLCSP50747 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLCSP50747 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.17■□□□□ 0.02
HLCSP50747 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms