Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
MRE11P49959 AC005829.1-201ENST00000570002 483 ntBASIC18.55■□□□□ 0.56
MRE11P49959 MIR4492-201ENST00000581627 80 ntBASIC18.55■□□□□ 0.56
MRE11P49959 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.55■□□□□ 0.56
MRE11P49959 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.55■□□□□ 0.56
MRE11P49959 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.55■□□□□ 0.56
MRE11P49959 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MRE11P49959 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
MRE11P49959 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.55■□□□□ 0.56
MRE11P49959 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.55■□□□□ 0.56
MRE11P49959 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 AC148477.4-201ENST00000613430 1793 ntBASIC18.55■□□□□ 0.56
MRE11P49959 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.55■□□□□ 0.56
MRE11P49959 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MRE11P49959 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
MRE11P49959 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MRE11P49959 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.54■□□□□ 0.56
MRE11P49959 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 CNTNAP3P2-201ENST00000617175 3861 ntBASIC18.54■□□□□ 0.56
MRE11P49959 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.54■□□□□ 0.56
MRE11P49959 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.54■□□□□ 0.56
MRE11P49959 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC18.54■□□□□ 0.56
MRE11P49959 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.54■□□□□ 0.56
MRE11P49959 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MRE11P49959 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.54■□□□□ 0.56
MRE11P49959 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.54■□□□□ 0.56
MRE11P49959 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.54■□□□□ 0.56
MRE11P49959 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.54■□□□□ 0.56
MRE11P49959 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MRE11P49959 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.54■□□□□ 0.56
MRE11P49959 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.54■□□□□ 0.56
MRE11P49959 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
MRE11P49959 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MRE11P49959 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MRE11P49959 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MRE11P49959 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.53■□□□□ 0.56
MRE11P49959 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MRE11P49959 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.53■□□□□ 0.56
MRE11P49959 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.53■□□□□ 0.56
MRE11P49959 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.53■□□□□ 0.56
MRE11P49959 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
MRE11P49959 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.53■□□□□ 0.56
MRE11P49959 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MRE11P49959 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 PCDHA3-202ENST00000532566 4594 ntBASIC18.53■□□□□ 0.56
MRE11P49959 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.53■□□□□ 0.56
MRE11P49959 AL138831.2-201ENST00000606564 490 ntBASIC18.53■□□□□ 0.56
MRE11P49959 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.53■□□□□ 0.56
MRE11P49959 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MRE11P49959 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC18.53■□□□□ 0.56
MRE11P49959 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MRE11P49959 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MRE11P49959 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MRE11P49959 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
MRE11P49959 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms