Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SOX2P48431 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14□□□□□ -0.17
SOX2P48431 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14□□□□□ -0.17
SOX2P48431 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SOX2P48431 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SOX2P48431 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
SOX2P48431 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SOX2P48431 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.99□□□□□ -0.17
SOX2P48431 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.99□□□□□ -0.17
SOX2P48431 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SOX2P48431 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.99□□□□□ -0.17
SOX2P48431 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SOX2P48431 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.99□□□□□ -0.17
SOX2P48431 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.99□□□□□ -0.17
SOX2P48431 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.99□□□□□ -0.17
SOX2P48431 AC010507.1-201ENST00000633895 436 ntBASIC13.99□□□□□ -0.17
SOX2P48431 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SOX2P48431 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SOX2P48431 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.99□□□□□ -0.17
SOX2P48431 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.98□□□□□ -0.17
SOX2P48431 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.98□□□□□ -0.17
SOX2P48431 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.98□□□□□ -0.17
SOX2P48431 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.98□□□□□ -0.17
SOX2P48431 FAM45BP-202ENST00000592932 1624 ntBASIC13.98□□□□□ -0.17
SOX2P48431 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SOX2P48431 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SOX2P48431 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 AC092474.2-201ENST00000424288 719 ntBASIC13.98□□□□□ -0.17
SOX2P48431 GPX1P2-201ENST00000429271 606 ntBASIC13.98□□□□□ -0.17
SOX2P48431 AC098831.1-202ENST00000438821 336 ntBASIC13.98□□□□□ -0.17
SOX2P48431 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.98□□□□□ -0.17
SOX2P48431 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.98□□□□□ -0.17
SOX2P48431 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.98□□□□□ -0.17
SOX2P48431 AL049840.3-201ENST00000602669 611 ntBASIC13.98□□□□□ -0.17
SOX2P48431 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SOX2P48431 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.98□□□□□ -0.17
SOX2P48431 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SOX2P48431 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms