Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GABRA4P48169 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.91□□□□□ -0.02
GABRA4P48169 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.91□□□□□ -0.02
GABRA4P48169 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.91□□□□□ -0.02
GABRA4P48169 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.91□□□□□ -0.02
GABRA4P48169 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.91□□□□□ -0.02
GABRA4P48169 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.91□□□□□ -0.02
GABRA4P48169 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.91□□□□□ -0.02
GABRA4P48169 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.91□□□□□ -0.02
GABRA4P48169 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.91□□□□□ -0.02
GABRA4P48169 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.91□□□□□ -0.02
GABRA4P48169 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.91□□□□□ -0.02
GABRA4P48169 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.91□□□□□ -0.02
GABRA4P48169 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
GABRA4P48169 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.91□□□□□ -0.02
GABRA4P48169 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GABRA4P48169 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
GABRA4P48169 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GABRA4P48169 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.9□□□□□ -0.02
GABRA4P48169 INTS4P2-202ENST00000614726 2019 ntBASIC14.9□□□□□ -0.02
GABRA4P48169 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 VDAC1P7-201ENST00000462417 847 ntBASIC14.9□□□□□ -0.02
GABRA4P48169 GAPDHP40-201ENST00000505218 1006 ntBASIC14.9□□□□□ -0.02
GABRA4P48169 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
GABRA4P48169 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.9□□□□□ -0.02
GABRA4P48169 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.9□□□□□ -0.02
GABRA4P48169 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.9□□□□□ -0.02
GABRA4P48169 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.9□□□□□ -0.02
GABRA4P48169 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.9□□□□□ -0.02
GABRA4P48169 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.9□□□□□ -0.02
GABRA4P48169 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 LINC02199-201ENST00000506655 2702 ntBASIC14.9□□□□□ -0.02
GABRA4P48169 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.9□□□□□ -0.02
GABRA4P48169 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.9□□□□□ -0.02
GABRA4P48169 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GABRA4P48169 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.9□□□□□ -0.02
GABRA4P48169 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GABRA4P48169 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
GABRA4P48169 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
GABRA4P48169 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GABRA4P48169 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GABRA4P48169 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.89□□□□□ -0.03
GABRA4P48169 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.89□□□□□ -0.03
GABRA4P48169 DOC2GP-204ENST00000639052 2548 ntBASIC14.89□□□□□ -0.03
GABRA4P48169 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.89□□□□□ -0.03
GABRA4P48169 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.89□□□□□ -0.03
GABRA4P48169 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
GABRA4P48169 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.89□□□□□ -0.03
GABRA4P48169 TMEM14DP-201ENST00000422205 345 ntBASIC14.89□□□□□ -0.03
GABRA4P48169 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.89□□□□□ -0.03
GABRA4P48169 AC134915.1-201ENST00000426461 574 ntBASIC14.89□□□□□ -0.03
GABRA4P48169 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GABRA4P48169 AC026410.3-201ENST00000514280 936 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms