Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CXCL5P42830 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
CXCL5P42830 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CXCL5P42830 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CXCL5P42830 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CXCL5P42830 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CXCL5P42830 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CXCL5P42830 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CXCL5P42830 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CXCL5P42830 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC10.74□□□□□ -0.69
CXCL5P42830 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.74□□□□□ -0.69
CXCL5P42830 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CXCL5P42830 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.74□□□□□ -0.69
CXCL5P42830 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CXCL5P42830 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CXCL5P42830 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CXCL5P42830 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
CXCL5P42830 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 AC136621.1-201ENST00000624017 2304 ntBASIC10.73□□□□□ -0.69
CXCL5P42830 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 RPS2P28-201ENST00000314255 741 ntBASIC10.73□□□□□ -0.69
CXCL5P42830 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CXCL5P42830 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 AC073621.1-201ENST00000392730 636 ntBASIC10.73□□□□□ -0.69
CXCL5P42830 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.73□□□□□ -0.69
CXCL5P42830 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.73□□□□□ -0.69
CXCL5P42830 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 FAM185BP-201ENST00000443595 716 ntBASIC10.73□□□□□ -0.69
CXCL5P42830 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 CXCL1P1-201ENST00000502804 216 ntBASIC10.73□□□□□ -0.69
CXCL5P42830 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 AC109635.5-201ENST00000533593 962 ntBASIC10.73□□□□□ -0.69
CXCL5P42830 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC10.73□□□□□ -0.69
CXCL5P42830 MIR4321-201ENST00000592276 80 ntBASIC10.73□□□□□ -0.69
CXCL5P42830 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 AC008735.5-201ENST00000623544 497 ntBASIC10.73□□□□□ -0.69
CXCL5P42830 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CXCL5P42830 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
CXCL5P42830 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CXCL5P42830 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.73□□□□□ -0.69
CXCL5P42830 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CXCL5P42830 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CXCL5P42830 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
CXCL5P42830 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CXCL5P42830 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.72□□□□□ -0.69
CXCL5P42830 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC10.72□□□□□ -0.69
CXCL5P42830 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.72□□□□□ -0.69
CXCL5P42830 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.72□□□□□ -0.69
CXCL5P42830 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CXCL5P42830 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC10.72□□□□□ -0.69
CXCL5P42830 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms