Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PTPN3P26045 AC051619.7-201ENST00000568314 623 ntBASIC16.12■□□□□ 0.17
PTPN3P26045 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 AL138828.2-201ENST00000615812 383 ntBASIC16.12■□□□□ 0.17
PTPN3P26045 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PTPN3P26045 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.12■□□□□ 0.17
PTPN3P26045 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTPN3P26045 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTPN3P26045 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 AC112693.3-201ENST00000624819 1983 ntBASIC16.11■□□□□ 0.17
PTPN3P26045 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTPN3P26045 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTPN3P26045 AC074338.1-201ENST00000416825 156 ntBASIC16.11■□□□□ 0.17
PTPN3P26045 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN3P26045 KLF2P3-201ENST00000451977 1087 ntBASIC16.11■□□□□ 0.17
PTPN3P26045 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN3P26045 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN3P26045 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN3P26045 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN3P26045 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN3P26045 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.11■□□□□ 0.17
PTPN3P26045 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN3P26045 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.11■□□□□ 0.17
PTPN3P26045 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 TEX28P1-201ENST00000613479 1221 ntBASIC16.11■□□□□ 0.17
PTPN3P26045 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PTPN3P26045 TEX28P2-201ENST00000617764 1221 ntBASIC16.11■□□□□ 0.17
PTPN3P26045 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 AL033527.5-202ENST00000641632 1098 ntBASIC16.11■□□□□ 0.17
PTPN3P26045 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.11■□□□□ 0.17
PTPN3P26045 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTPN3P26045 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTPN3P26045 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTPN3P26045 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.11■□□□□ 0.17
PTPN3P26045 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTPN3P26045 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PTPN3P26045 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PTPN3P26045 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN3P26045 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 SERBP1P3-201ENST00000459980 809 ntBASIC16.1■□□□□ 0.17
PTPN3P26045 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN3P26045 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.1■□□□□ 0.17
PTPN3P26045 MIR6069-201ENST00000620069 79 ntBASIC16.1■□□□□ 0.17
PTPN3P26045 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTPN3P26045 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PTPN3P26045 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms