Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.94■□□□□ 0.62
NCLP19338 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC18.94■□□□□ 0.62
NCLP19338 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
NCLP19338 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.94■□□□□ 0.62
NCLP19338 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.94■□□□□ 0.62
NCLP19338 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.94■□□□□ 0.62
NCLP19338 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NCLP19338 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.94■□□□□ 0.62
NCLP19338 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NCLP19338 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NCLP19338 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NCLP19338 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NCLP19338 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 AC007967.2-201ENST00000432613 625 ntBASIC18.93■□□□□ 0.62
NCLP19338 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.93■□□□□ 0.62
NCLP19338 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.93■□□□□ 0.62
NCLP19338 RNA5SP416-201ENST00000516838 111 ntBASIC18.93■□□□□ 0.62
NCLP19338 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.93■□□□□ 0.62
NCLP19338 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.93■□□□□ 0.62
NCLP19338 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.93■□□□□ 0.62
NCLP19338 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
NCLP19338 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 AC138035.3-201ENST00000622706 2791 ntBASIC18.93■□□□□ 0.62
NCLP19338 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.93■□□□□ 0.62
NCLP19338 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.93■□□□□ 0.62
NCLP19338 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NCLP19338 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NCLP19338 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCLP19338 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 AL109954.1-202ENST00000564051 2148 ntBASIC18.92■□□□□ 0.62
NCLP19338 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NCLP19338 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NCLP19338 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.92■□□□□ 0.62
NCLP19338 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NCLP19338 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.92■□□□□ 0.62
NCLP19338 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.92■□□□□ 0.62
NCLP19338 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCLP19338 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.92■□□□□ 0.62
NCLP19338 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.92■□□□□ 0.62
NCLP19338 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.92■□□□□ 0.62
NCLP19338 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms