Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
DEFA4P12838 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.95□□□□□ -0.34
DEFA4P12838 AL009183.1-201ENST00000603760 355 ntBASIC12.95□□□□□ -0.34
DEFA4P12838 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
DEFA4P12838 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.95□□□□□ -0.34
DEFA4P12838 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.95□□□□□ -0.34
DEFA4P12838 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 CICP13-201ENST00000422015 2789 ntBASIC12.95□□□□□ -0.34
DEFA4P12838 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
DEFA4P12838 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
DEFA4P12838 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.95□□□□□ -0.34
DEFA4P12838 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
DEFA4P12838 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA4P12838 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 IL9RP2-201ENST00000423948 1312 ntBASIC12.94□□□□□ -0.34
DEFA4P12838 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 CICP24-201ENST00000605464 2705 ntBASIC12.94□□□□□ -0.34
DEFA4P12838 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
DEFA4P12838 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.94□□□□□ -0.34
DEFA4P12838 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.94□□□□□ -0.34
DEFA4P12838 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.94□□□□□ -0.34
DEFA4P12838 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 AC109635.5-201ENST00000533593 962 ntBASIC12.94□□□□□ -0.34
DEFA4P12838 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.94□□□□□ -0.34
DEFA4P12838 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.94□□□□□ -0.34
DEFA4P12838 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.94□□□□□ -0.34
DEFA4P12838 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.94□□□□□ -0.34
DEFA4P12838 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 AL161645.1-201ENST00000622716 1255 ntBASIC12.94□□□□□ -0.34
DEFA4P12838 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 AC099063.4-201ENST00000641099 1602 ntBASIC12.94□□□□□ -0.34
DEFA4P12838 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 AC007686.3-201ENST00000619017 3487 ntBASIC12.94□□□□□ -0.34
DEFA4P12838 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DEFA4P12838 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA4P12838 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.94□□□□□ -0.34
DEFA4P12838 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 AC139749.1-202ENST00000617529 3139 ntBASIC12.93□□□□□ -0.34
DEFA4P12838 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
DEFA4P12838 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.93□□□□□ -0.34
DEFA4P12838 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 AC016027.1-202ENST00000607927 1699 ntBASIC12.93□□□□□ -0.34
DEFA4P12838 AC006058.4-201ENST00000624016 1670 ntBASIC12.93□□□□□ -0.34
DEFA4P12838 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
DEFA4P12838 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms