Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CHGBP05060 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.9■□□□□ 0.62
CHGBP05060 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.89■□□□□ 0.62
CHGBP05060 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHGBP05060 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CHGBP05060 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
CHGBP05060 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHGBP05060 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.89■□□□□ 0.62
CHGBP05060 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.89■□□□□ 0.61
CHGBP05060 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.89■□□□□ 0.61
CHGBP05060 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
CHGBP05060 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.89■□□□□ 0.61
CHGBP05060 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.89■□□□□ 0.61
CHGBP05060 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.89■□□□□ 0.61
CHGBP05060 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 RN7SL399P-201ENST00000471648 279 ntBASIC18.89■□□□□ 0.61
CHGBP05060 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.89■□□□□ 0.61
CHGBP05060 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 AC055876.2-201ENST00000531834 546 ntBASIC18.89■□□□□ 0.61
CHGBP05060 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.89■□□□□ 0.61
CHGBP05060 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.89■□□□□ 0.61
CHGBP05060 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CHGBP05060 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.89■□□□□ 0.61
CHGBP05060 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHGBP05060 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHGBP05060 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHGBP05060 PPT1-215ENST00000641471 2368 ntBASIC18.89■□□□□ 0.61
CHGBP05060 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHGBP05060 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CHGBP05060 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
CHGBP05060 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHGBP05060 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHGBP05060 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHGBP05060 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.88■□□□□ 0.61
CHGBP05060 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CHGBP05060 AC013268.4-201ENST00000637413 2228 ntBASIC18.88■□□□□ 0.61
CHGBP05060 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.88■□□□□ 0.61
CHGBP05060 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHGBP05060 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.88■□□□□ 0.61
CHGBP05060 AL353779.1-201ENST00000434793 351 ntBASIC18.88■□□□□ 0.61
CHGBP05060 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.88■□□□□ 0.61
CHGBP05060 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.88■□□□□ 0.61
CHGBP05060 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHGBP05060 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.88■□□□□ 0.61
CHGBP05060 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CHGBP05060 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 AC073347.1-201ENST00000421633 2643 ntBASIC18.88■□□□□ 0.61
CHGBP05060 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.88■□□□□ 0.61
CHGBP05060 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.88■□□□□ 0.61
CHGBP05060 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.88■□□□□ 0.61
CHGBP05060 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.88■□□□□ 0.61
CHGBP05060 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHGBP05060 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CHGBP05060 SSR4P1-203ENST00000599569 2260 ntBASIC18.88■□□□□ 0.61
CHGBP05060 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.88■□□□□ 0.61
CHGBP05060 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHGBP05060 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CHGBP05060 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHGBP05060 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CHGBP05060 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHGBP05060 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms