Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 C18orf15-201ENST00000623680 2534 ntBASIC14.3□□□□□ -0.12
HLA-DPB1P04440 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 AC245100.5-201ENST00000452108 331 ntBASIC14.29□□□□□ -0.12
HLA-DPB1P04440 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 POLD2P1-201ENST00000511220 997 ntBASIC14.29□□□□□ -0.12
HLA-DPB1P04440 RNA5SP416-201ENST00000516838 111 ntBASIC14.29□□□□□ -0.12
HLA-DPB1P04440 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 AC023141.13-201ENST00000604991 943 ntBASIC14.29□□□□□ -0.12
HLA-DPB1P04440 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 AC004877.2-201ENST00000623941 599 ntBASIC14.29□□□□□ -0.12
HLA-DPB1P04440 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 AC025580.3-201ENST00000617932 1424 ntBASIC14.29□□□□□ -0.12
HLA-DPB1P04440 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DPB1P04440 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 MIR574-201ENST00000385209 96 ntBASIC14.28□□□□□ -0.12
HLA-DPB1P04440 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 HMGA1P7-201ENST00000406908 502 ntBASIC14.28□□□□□ -0.12
HLA-DPB1P04440 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 RHOQP3-201ENST00000437982 621 ntBASIC14.28□□□□□ -0.12
HLA-DPB1P04440 AL591424.1-201ENST00000442569 1213 ntBASIC14.28□□□□□ -0.12
HLA-DPB1P04440 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 AC091951.1-201ENST00000512854 2465 ntBASIC14.28□□□□□ -0.12
HLA-DPB1P04440 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 AC007064.4-201ENST00000637740 555 ntBASIC14.28□□□□□ -0.12
HLA-DPB1P04440 AC067750.1-201ENST00000608826 6545 ntBASIC14.28□□□□□ -0.12
HLA-DPB1P04440 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPB1P04440 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 272.9 ms