Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCL13O43927 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CXCL13O43927 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.15□□□□□ -0.14
CXCL13O43927 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.15□□□□□ -0.14
CXCL13O43927 KRT18P64-201ENST00000434946 1219 ntBASIC14.15□□□□□ -0.14
CXCL13O43927 SLED1-202ENST00000512051 380 ntBASIC14.15□□□□□ -0.14
CXCL13O43927 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.15□□□□□ -0.14
CXCL13O43927 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
CXCL13O43927 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CXCL13O43927 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 AL132655.2-201ENST00000596276 594 ntBASIC14.15□□□□□ -0.14
CXCL13O43927 LINC02084-201ENST00000606069 1096 ntBASIC14.15□□□□□ -0.14
CXCL13O43927 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CXCL13O43927 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCL13O43927 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CXCL13O43927 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CXCL13O43927 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL13O43927 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCL13O43927 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL13O43927 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 AL365203.3-201ENST00000609742 2057 ntBASIC14.14□□□□□ -0.15
CXCL13O43927 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.14□□□□□ -0.15
CXCL13O43927 PIN1P1-201ENST00000412108 996 ntBASIC14.14□□□□□ -0.15
CXCL13O43927 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 MEIS3P1-201ENST00000495167 958 ntBASIC14.14□□□□□ -0.15
CXCL13O43927 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.14□□□□□ -0.15
CXCL13O43927 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 AC023310.3-201ENST00000557027 670 ntBASIC14.14□□□□□ -0.15
CXCL13O43927 AC100756.1-201ENST00000562736 682 ntBASIC14.14□□□□□ -0.15
CXCL13O43927 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 AC138749.3-201ENST00000567691 622 ntBASIC14.14□□□□□ -0.15
CXCL13O43927 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.14□□□□□ -0.15
CXCL13O43927 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 AC116165.1-201ENST00000611806 668 ntBASIC14.14□□□□□ -0.15
CXCL13O43927 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.14□□□□□ -0.15
CXCL13O43927 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
CXCL13O43927 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCL13O43927 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL13O43927 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms