Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 EIF5AP2-201ENST00000585668 1047 ntBASIC19.39■□□□□ 0.7
RGPD3A6NKT7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 AC138466.5-201ENST00000624002 808 ntBASIC19.39■□□□□ 0.7
RGPD3A6NKT7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.39■□□□□ 0.7
RGPD3A6NKT7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 KRT8P31-201ENST00000504812 1408 ntBASIC19.39■□□□□ 0.69
RGPD3A6NKT7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 FRMPD2B-201ENST00000431305 1347 ntBASIC19.39■□□□□ 0.69
RGPD3A6NKT7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 AC008805.1-201ENST00000590892 364 ntBASIC19.39■□□□□ 0.69
RGPD3A6NKT7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 AC138696.2-201ENST00000607376 223 ntBASIC19.39■□□□□ 0.69
RGPD3A6NKT7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RGPD3A6NKT7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 RPL8P2-201ENST00000430538 502 ntBASIC19.38■□□□□ 0.69
RGPD3A6NKT7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 MIR4522-201ENST00000584932 87 ntBASIC19.38■□□□□ 0.69
RGPD3A6NKT7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RGPD3A6NKT7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 AL627422.1-201ENST00000434104 580 ntBASIC19.37■□□□□ 0.69
RGPD3A6NKT7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 ALG1L6P-201ENST00000515248 758 ntBASIC19.37■□□□□ 0.69
RGPD3A6NKT7 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 AC012158.2-201ENST00000536546 354 ntBASIC19.37■□□□□ 0.69
RGPD3A6NKT7 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 NUDT4P2-201ENST00000578341 546 ntBASIC19.37■□□□□ 0.69
RGPD3A6NKT7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 AC105020.1-201ENST00000435356 2205 ntBASIC19.37■□□□□ 0.69
RGPD3A6NKT7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 BCAS2P2-201ENST00000425064 674 ntBASIC19.37■□□□□ 0.69
RGPD3A6NKT7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RGPD3A6NKT7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.36■□□□□ 0.69
RGPD3A6NKT7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RGPD3A6NKT7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RGPD3A6NKT7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RGPD3A6NKT7 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RGPD3A6NKT7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
RGPD3A6NKT7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RGPD3A6NKT7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms