Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRCH1Q9Y2L9 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 AL353692.3-201ENST00000407031 1396 ntBASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 TOP3BP1-201ENST00000420768 1380 ntBASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRCH1Q9Y2L9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 AC067750.1-201ENST00000608826 6545 ntBASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 DRAXINP1-201ENST00000437611 948 ntBASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 AP002383.4-201ENST00000442518 975 ntBASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 VENTXP7-201ENST00000475503 772 ntBASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 MIR3652-201ENST00000579335 131 ntBASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 MIR4492-201ENST00000581627 80 ntBASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 IGHV3-41-201ENST00000613121 348 ntBASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.12■□□□□ 0.01
LRCH1Q9Y2L9 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms