Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC23.86■■□□□ 1.41
SCAF1Q9H7N4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC23.86■■□□□ 1.41
SCAF1Q9H7N4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SCAF1Q9H7N4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SCAF1Q9H7N4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC23.86■■□□□ 1.41
SCAF1Q9H7N4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCAF1Q9H7N4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCAF1Q9H7N4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
SCAF1Q9H7N4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 AC119751.2-201ENST00000504529 210 ntBASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 WASH4P-201ENST00000564273 1246 ntBASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 AL109936.8-201ENST00000641772 604 ntBASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 AC009949.1-201ENST00000623048 1830 ntBASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCAF1Q9H7N4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC007041.1-201ENST00000438989 1155 ntBASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 SLC25A6P2-201ENST00000497974 877 ntBASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC008738.7-201ENST00000609744 511 ntBASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC009336.1-201ENST00000608941 1553 ntBASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC129492.6-201ENST00000611383 1305 ntBASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 TTTY23B-201ENST00000442790 549 ntBASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 CD74-212ENST00000524315 584 ntTSL 5 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 AC008494.3-201ENST00000606615 944 ntBASIC23.84■■□□□ 1.41
SCAF1Q9H7N4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SCAF1Q9H7N4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms