Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 BIRC6-210ENST00000483194 702 ntTSL 34.34□□□□□ -1.712e-8■□□□□ 8.8
XRN2Q9H0D6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.12■■■□□ 2.253e-6■□□□□ 8.7
XRN2Q9H0D6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.78■■■□□ 2.23e-6■□□□□ 8.7
XRN2Q9H0D6 TBX2-AS1-204ENST00000591313 640 ntTSL 222.59■■□□□ 1.213e-6■□□□□ 8.7
XRN2Q9H0D6 TBX2-AS1-205ENST00000592009 330 ntTSL 320.17■□□□□ 0.823e-6■□□□□ 8.7
XRN2Q9H0D6 CFB-272ENST00000452035 1866 ntTSL 216.67■□□□□ 0.263e-6■□□□□ 8.7
XRN2Q9H0D6 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC14.09□□□□□ -0.153e-6■□□□□ 8.7
XRN2Q9H0D6 SLC3A2-210ENST00000537839 584 ntTSL 513.82□□□□□ -0.22e-16■□□□□ 8.7
XRN2Q9H0D6 SLC3A2-218ENST00000541649 515 ntTSL 38.65□□□□□ -1.022e-16■□□□□ 8.7
XRN2Q9H0D6 HNF4A-207ENST00000609262 540 ntTSL 1 (best)21.25■□□□□ 0.994e-7■□□□□ 8.7
XRN2Q9H0D6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.64■■□□□ 1.214e-7■□□□□ 8.7
XRN2Q9H0D6 IKBKB-225ENST00000522785 527 ntTSL 420.68■□□□□ 0.94e-7■□□□□ 8.7
XRN2Q9H0D6 EME2-206ENST00000570069 5613 ntTSL 217.79■□□□□ 0.448e-7■□□□□ 8.7
XRN2Q9H0D6 IKBKB-204ENST00000517502 498 ntTSL 311.57□□□□□ -0.564e-7■□□□□ 8.7
XRN2Q9H0D6 NBEAL2-201ENST00000416683 6364 ntTSL 1 (best)15.83■□□□□ 0.131e-7■□□□□ 8.7
XRN2Q9H0D6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.041e-7■□□□□ 8.7
XRN2Q9H0D6 TMC6-204ENST00000585849 552 ntTSL 223.15■■□□□ 1.32e-9■□□□□ 8.7
XRN2Q9H0D6 PIEZO1-209ENST00000490756 446 ntTSL 324.75■■□□□ 1.551e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-219ENST00000568265 1140 ntAPPRIS ALT2 TSL 423.43■■□□□ 1.341e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.411e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-208ENST00000563428 2531 ntTSL 217.01■□□□□ 0.311e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-204ENST00000544090 2747 ntTSL 215.99■□□□□ 0.151e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-217ENST00000566903 2628 ntTSL 514.95□□□□□ -0.021e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.11e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-212ENST00000564774 4637 ntTSL 214.1□□□□□ -0.151e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.341e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.471e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.491e-13■□□□□ 8.7
XRN2Q9H0D6 TAF1C-209ENST00000564208 3810 ntTSL 211.4□□□□□ -0.591e-13■□□□□ 8.7
XRN2Q9H0D6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.572e-10■□□□□ 8.7
XRN2Q9H0D6 CLASRP-206ENST00000585615 633 ntTSL 218.14■□□□□ 0.492e-10■□□□□ 8.7
XRN2Q9H0D6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.052e-10■□□□□ 8.7
XRN2Q9H0D6 YDJC-205ENST00000468686 1423 ntTSL 1 (best)24.76■■□□□ 1.556e-13■□□□□ 8.7
XRN2Q9H0D6 YDJC-207ENST00000482998 1388 ntTSL 522.72■■□□□ 1.236e-13■□□□□ 8.7
XRN2Q9H0D6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.116e-13■□□□□ 8.7
XRN2Q9H0D6 YDJC-203ENST00000415762 1410 ntTSL 1 (best)21.64■■□□□ 1.066e-13■□□□□ 8.7
XRN2Q9H0D6 TMC6-220ENST00000591756 475 ntTSL 221.47■■□□□ 1.038e-7■□□□□ 8.7
XRN2Q9H0D6 YDJC-204ENST00000464015 1613 ntTSL 1 (best)21.23■□□□□ 0.996e-13■□□□□ 8.7
XRN2Q9H0D6 YDJC-206ENST00000473985 1494 ntTSL 521.22■□□□□ 0.996e-13■□□□□ 8.7
XRN2Q9H0D6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.58■□□□□ 0.726e-13■□□□□ 8.7
XRN2Q9H0D6 TMC6-217ENST00000590934 386 ntTSL 512.35□□□□□ -0.438e-7■□□□□ 8.7
XRN2Q9H0D6 SETD5-208ENST00000421188 1323 ntTSL 510.89□□□□□ -0.678e-7■□□□□ 8.7
XRN2Q9H0D6 PTTG1IP-205ENST00000474737 580 ntTSL 319.19■□□□□ 0.661e-16■□□□□ 8.7
XRN2Q9H0D6 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.24■□□□□ 0.191e-16■□□□□ 8.7
XRN2Q9H0D6 PTTG1IP-207ENST00000494690 612 ntTSL 514.29□□□□□ -0.121e-16■□□□□ 8.7
XRN2Q9H0D6 FTCD-211ENST00000494498 840 ntTSL 322.91■■□□□ 1.265e-9■□□□□ 8.6
XRN2Q9H0D6 FTCD-205ENST00000446405 436 ntTSL 322.82■■□□□ 1.245e-9■□□□□ 8.6
XRN2Q9H0D6 FTCD-206ENST00000460011 1260 ntTSL 1 (best)22.79■■□□□ 1.245e-9■□□□□ 8.6
XRN2Q9H0D6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.075e-9■□□□□ 8.6
XRN2Q9H0D6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.43■□□□□ 0.865e-9■□□□□ 8.6
XRN2Q9H0D6 MRPL20-202ENST00000477686 314 ntTSL 317.86■□□□□ 0.455e-9■□□□□ 8.6
XRN2Q9H0D6 MRPL20-204ENST00000487659 1693 ntTSL 217.72■□□□□ 0.435e-9■□□□□ 8.6
XRN2Q9H0D6 MRPL20-205ENST00000492508 588 ntTSL 213□□□□□ -0.335e-9■□□□□ 8.6
XRN2Q9H0D6 TXNDC11-206ENST00000573174 919 ntTSL 328.78■■■□□ 2.22e-6■□□□□ 8.6
XRN2Q9H0D6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.26■■□□□ 1.474e-11■□□□□ 8.6
XRN2Q9H0D6 SAFB-209ENST00000591666 632 ntTSL 323.24■■□□□ 1.312e-6■□□□□ 8.6
XRN2Q9H0D6 MUS81-204ENST00000525147 482 ntTSL 519.36■□□□□ 0.692e-6■□□□□ 8.6
XRN2Q9H0D6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.222e-6■□□□□ 8.6
XRN2Q9H0D6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.172e-6■□□□□ 8.6
XRN2Q9H0D6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.044e-11■□□□□ 8.6
XRN2Q9H0D6 TRA2B-206ENST00000456380 1697 ntTSL 515.25■□□□□ 0.034e-11■□□□□ 8.6
XRN2Q9H0D6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.022e-6■□□□□ 8.6
XRN2Q9H0D6 TRA2B-214ENST00000487615 4485 ntTSL 1 (best)11.99□□□□□ -0.494e-11■□□□□ 8.6
XRN2Q9H0D6 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.552e-6■□□□□ 8.6
XRN2Q9H0D6 SEC61A1-205ENST00000483956 3046 ntTSL 1 (best)11.03□□□□□ -0.642e-6■□□□□ 8.6
XRN2Q9H0D6 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC10.37□□□□□ -0.752e-6■□□□□ 8.6
XRN2Q9H0D6 TXNDC11-209ENST00000576969 863 ntTSL 39.84□□□□□ -0.832e-6■□□□□ 8.6
XRN2Q9H0D6 TRA2B-204ENST00000414862 710 ntTSL 39.6□□□□□ -0.874e-11■□□□□ 8.6
XRN2Q9H0D6 TRA2B-209ENST00000466832 2414 ntTSL 26.18□□□□□ -1.424e-11■□□□□ 8.6
XRN2Q9H0D6 TRA2B-207ENST00000463328 2780 ntTSL 25.66□□□□□ -1.54e-11■□□□□ 8.6
XRN2Q9H0D6 MT-TP-201ENST00000387461 68 ntBASIC5.38□□□□□ -1.554e-21■□□□□ 8.6
XRN2Q9H0D6 TRA2B-201ENST00000259043 943 ntTSL 35.12□□□□□ -1.594e-11■□□□□ 8.6
XRN2Q9H0D6 TRA2B-215ENST00000492417 4141 ntTSL 1 (best)4.88□□□□□ -1.634e-11■□□□□ 8.6
XRN2Q9H0D6 SAFB-208ENST00000590485 548 ntTSL 34.76□□□□□ -1.652e-6■□□□□ 8.6
XRN2Q9H0D6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.61□□□□□ -0.072e-14■□□□□ 8.6
XRN2Q9H0D6 AFDN-210ENST00000423229 1807 ntTSL 1 (best)8.89□□□□□ -0.992e-14■□□□□ 8.6
XRN2Q9H0D6 HNRNPH1-242ENST00000522256 492 ntTSL 418.17■□□□□ 0.52e-10■□□□□ 8.6
XRN2Q9H0D6 SDF2L1-202ENST00000466935 601 ntTSL 229.99■■■□□ 2.399e-7■□□□□ 8.6
XRN2Q9H0D6 LRRC75B-202ENST00000404045 1417 ntTSL 332.94■■■□□ 2.864e-9■□□□□ 8.6
XRN2Q9H0D6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.854e-9■□□□□ 8.6
XRN2Q9H0D6 LRRC75B-206ENST00000465334 957 ntTSL 232.53■■■□□ 2.84e-9■□□□□ 8.6
XRN2Q9H0D6 LRRC75B-203ENST00000446942 1828 ntTSL 530.06■■■□□ 2.44e-9■□□□□ 8.6
XRN2Q9H0D6 LRRC75B-204ENST00000460524 2276 ntTSL 528.59■■■□□ 2.174e-9■□□□□ 8.6
XRN2Q9H0D6 LRRC75B-207ENST00000491910 2943 ntTSL 221.97■■□□□ 1.114e-9■□□□□ 8.6
XRN2Q9H0D6 LRRC75B-205ENST00000464490 575 ntTSL 419.72■□□□□ 0.754e-9■□□□□ 8.6
XRN2Q9H0D6 ERICH1-204ENST00000518895 585 ntTSL 317.82■□□□□ 0.444e-9■□□□□ 8.6
XRN2Q9H0D6 CSNK2A1-205ENST00000460062 552 ntTSL 417.25■□□□□ 0.358e-7■□□□□ 8.6
XRN2Q9H0D6 CSNK2A1-206ENST00000608066 577 ntTSL 417.25■□□□□ 0.358e-7■□□□□ 8.6
XRN2Q9H0D6 CSNK2A1-209ENST00000609606 589 ntTSL 217.25■□□□□ 0.358e-7■□□□□ 8.6
XRN2Q9H0D6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.034e-9■□□□□ 8.6
XRN2Q9H0D6 ITIH3-205ENST00000465243 824 ntTSL 511.44□□□□□ -0.584e-9■□□□□ 8.6
XRN2Q9H0D6 ITIH3-203ENST00000463893 529 ntTSL 410.15□□□□□ -0.784e-9■□□□□ 8.6
XRN2Q9H0D6 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC9.94□□□□□ -0.824e-9■□□□□ 8.6
XRN2Q9H0D6 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC9.17□□□□□ -0.944e-9■□□□□ 8.6
XRN2Q9H0D6 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.79□□□□□ -14e-9■□□□□ 8.6
XRN2Q9H0D6 LARP1B-209ENST00000508819 1891 ntTSL 57.03□□□□□ -1.284e-9■□□□□ 8.6
XRN2Q9H0D6 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.344e-9■□□□□ 8.6
XRN2Q9H0D6 IGF2BP2-207ENST00000466214 138 ntTSL 53.66□□□□□ -1.824e-9■□□□□ 8.6
XRN2Q9H0D6 ATXN2L-206ENST00000561539 509 ntTSL 35.17□□□□□ -1.581e-14■□□□□ 8.5
XRN2Q9H0D6 ATXN2L-220ENST00000566080 329 ntTSL 33.55□□□□□ -1.841e-14■□□□□ 8.5
Retrieved 100 of 21,068 protein–RNA pairs in 533.4 ms